Actomic Structure, Lecture Notes - Chemistry, Study notes of Chemistry

Atomic structure Protons ,Neutron ,Electorn, Bohr model ,Heisenburg Uncertainty Principle

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2010/2011

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Geochemistry
DM Sherman, University of Bristol
2007/2008
Page ‹#›
Atomic Structure and Bonding
Geochemistry, DM Sherman
University of Bristol
Atomic Structure
Atoms consist of a nucleus (protons
+ neutrons) surrounded by electrons.
Number of protons determines the
atomic number (element).
Number of neutrons + protons
determines atomic mass (isotope).
Protons are positively charged,
neutrons are neutral and electrons
are negatively charged.
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DM Sherman, University of Bristol

Atomic Structure and Bonding

Geochemistry, DM Sherman

University of Bristol

Atomic Structure

  • Atoms consist of a nucleus ( protons
    • neutrons ) surrounded by electrons.
  • Number of protons determines the atomic number (element).
  • Number of neutrons + protons determines atomic mass ( isotope ).
  • Protons are positively charged, neutrons are neutral and electrons are negatively charged.

DM Sherman, University of Bristol

Electrons in Atoms: Non-Classical Behavior The attraction of electrons (-) to the nucleus(+) obeys Coulomb’s law: ! F = qaqb 4 "# 0 r^2 In atoms, however, electrons do not collapse into the nucleus but instead behave like spherical waves with quantized energies and angular momenta. Quantum Mechanics

  • Instead of Newton’s equations of motion, we solve the Schrodinger Equation ! h

2 m "

+ V # = E

which describes the system in terms of a wavefunction Ψ with energy E.

  • Explains wave/particle duality and quantized states of electrons in atoms.

DM Sherman, University of Bristol

The Quantum Numbers and the Periodic Table of the Elements Electronic Configurations: Pauli Exclusion Principle We can approximate the electronic structures of multielectronic atoms as electronic configurations over one-electron (hydrogen-like) orbitals. The Pauli Exclusion principle states that no two electrons in an atom can have the same four quantum numbers. Hence, we can only put two electrons (one spin-up and one spin-down) in each nlm orbital.

DM Sherman, University of Bristol

Stable Electronic Configurations Na: open shell Na+: closed shell Atoms like to adopt closed-shell configurations. To do this, they may gain or lose electrons to become ions Na^0 : open shell Na+: closed shell Stable Electronic Configurations (Cont.) Si^0 : open shell Si4+: closed shell The most stable ionization state of Si is the Si4+^ ion. The semi- closed shell Si2+^ ion does exist in interstellar gas, however.

DM Sherman, University of Bristol

Electronegativity Stable Ions and Oxidation states The full ionic charge is only realized in completely ionic compounds. Otherwise it is only the formal oxidation state.

DM Sherman, University of Bristol

Chemical bonding: ionic vs. covalent When electrons are completely transferred between atoms to yield cations and anions, the atoms will be held together by ionic bonds. If atoms have similar electronegativities, they adopt closed-shell configurations by sharing electrons with each other; the atoms are held together by covalent bonds. Ionic Radii

  • An ion with a closed-shell configuration will have a spherical electron distribution.
  • To a first approximation, the ionic radius will be constant.
  • A better approximation gives different radii for each coordination number.
  • The radius of an ion can be a very useful predictor of an ion’s geochemical behaviour.

DM Sherman, University of Bristol

Pauling’s Rules for Ionic Structures (cont.) Rule 2 : For an anion to be stable, the sum of the strengths* of the electrostatic bonds that reach an anion from its coordination of cations will equal the charge on the anion. This is the electrostatic valency principle****. (*The Pauling bond strength that a cation gives to an anion is the cation charge/coordination number). Pauling’s Rules for Ionic Structures (cont.) Rule 3: The sharing of edges and faces by coordination polyhedra decreases the stability of a structure. There are two polymorphs of TiO 2. Rutile is more stable (by 6 kJ/mole) than anatase because there is less edge-sharing in the structure. Anatase Rutile

DM Sherman, University of Bristol

Breakdown of Pauling’s Rules Pauling’s rules will fail when bonds are not ionic. Sulfide minerals tend to have covalent bonds with S. Metallic bonding is also found is metals and many sulfides. Mackinawite (FeS) Triolite (FeS) Breakdown of Pauling’s Rules At high pressure, Pauling’s rules appear to breakdown as cations adopt high coordination numbers. (We could view this as a pressure-induced decrease in the ionic radius of O-2^ relative to metal ion radii.) MgSiO 3 Perovskite Stishovite (SiO 2 )