Ion Exchange Chromatography and Protein Interactions, Quizzes of Biology

This document defines key terms related to ion exchange chromatography (iex), a method used to separate proteins based on charge. It explains the isoelectric point (pi), anion and cation exchangers, anion and cation exchange chromatography, protein concentration in cells, elution, nacl gradient, and solubility test. Sample questions are also provided.

Typology: Quizzes

Pre 2010

Uploaded on 03/03/2010

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TERM 1
Ion exchange chromatography (IEX)
DEFINITION 1
separates proteins based on charge. THe amino acids of
proteins electrostatically bind to a column containing the
opposite charge and it elutes it by changing the salt
concentration or pH
TERM 2
isoelectric point (pI)
DEFINITION 2
the pH at which there is an overall n et neutral charge on the
moleculte. The positive or negative c harge cancel eachother out.
the net charge of a protein is depend ent upon the pH of the
surrounding buffer. if the pH increase s above the pI, then protons
dissociate from proteins side chains an d leave a negative charge
on molecule. If pH decreases below t he pI, protons associate with
the protein and give it a positive char ge.
TERM 3
anion exchanger
DEFINITION 3
one of 2 types of ion exchangers which chemically bind
negative charges. These charges on the exchangers are
balanced by counterions. for Anion the counterion is chloride
TERM 4
cation exchanger
DEFINITION 4
an ion exchanger that binds to positive charges and the ion
exchanger is an metal ion for cation. ion exchangers are
named for the counterion
TERM 5
anion exchange chromatography
DEFINITION 5
exchanges negatively charged anions which is done by using
beads with a positive charge. The pH of the buffer must be
high than the pI of the protein
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Ion exchange chromatography (IEX)

separates proteins based on charge. THe amino acids of proteins electrostatically bind to a column containing the opposite charge and it elutes it by changing the salt concentration or pH TERM 2

isoelectric point (pI)

DEFINITION 2 the pH at which there is an overall net neutral charge on the moleculte. The positive or negative charge cancel eachother out. the net charge of a protein is dependent upon the pH of the surrounding buffer. if the pH increases above the pI, then protons dissociate from proteins side chains and leave a negative charge on molecule. If pH decreases below the pI, protons associate with the protein and give it a positive charge. TERM 3

anion exchanger

DEFINITION 3 one of 2 types of ion exchangers which chemically bind negative charges. These charges on the exchangers are balanced by counterions. for Anion the counterion is chloride TERM 4

cation exchanger

DEFINITION 4 an ion exchanger that binds to positive charges and the ion exchanger is an metal ion for cation. ion exchangers are named for the counterion TERM 5

anion exchange chromatography

DEFINITION 5 exchanges negatively charged anions which is done by using beads with a positive charge. The pH of the buffer must be high than the pI of the protein

cation exchange chromatography

exchanges positively charged cations done by using beads of a negative charge. for protein binding the pH of the buffer must be lower than the pI of the protein TERM 7

BONUS what is the protein concentration in

your cells?

DEFINITION 7 15-35% of cell volume, up to 400 mg/ml. More of a gel than solution, greatly can affect kinetics of enzymes TERM 8

eluted

DEFINITION 8 proteins unbind from column using ions. NaCL is used as teh sodium to compete with positively charged proteins to cation exchange. Chlorine can complete with negative charged proteins- anion. They will elute based on the strength of their interaction with the beads. If the pH is close to the pI then they elute first TERM 9

NaCl gradient

DEFINITION 9 slowly increases the salt concentration used to elute proteins one by one rather than all at once TERM 10

solubility test

DEFINITION 10 protein is placed in various buffers and precipitation can be observed. This is used to determine which IEX is appropriate which depends upon the pH at which the protein of interest is stable.