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This document defines key terms related to ion exchange chromatography (iex), a method used to separate proteins based on charge. It explains the isoelectric point (pi), anion and cation exchangers, anion and cation exchange chromatography, protein concentration in cells, elution, nacl gradient, and solubility test. Sample questions are also provided.
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separates proteins based on charge. THe amino acids of proteins electrostatically bind to a column containing the opposite charge and it elutes it by changing the salt concentration or pH TERM 2
DEFINITION 2 the pH at which there is an overall net neutral charge on the moleculte. The positive or negative charge cancel eachother out. the net charge of a protein is dependent upon the pH of the surrounding buffer. if the pH increases above the pI, then protons dissociate from proteins side chains and leave a negative charge on molecule. If pH decreases below the pI, protons associate with the protein and give it a positive charge. TERM 3
DEFINITION 3 one of 2 types of ion exchangers which chemically bind negative charges. These charges on the exchangers are balanced by counterions. for Anion the counterion is chloride TERM 4
DEFINITION 4 an ion exchanger that binds to positive charges and the ion exchanger is an metal ion for cation. ion exchangers are named for the counterion TERM 5
DEFINITION 5 exchanges negatively charged anions which is done by using beads with a positive charge. The pH of the buffer must be high than the pI of the protein
exchanges positively charged cations done by using beads of a negative charge. for protein binding the pH of the buffer must be lower than the pI of the protein TERM 7
DEFINITION 7 15-35% of cell volume, up to 400 mg/ml. More of a gel than solution, greatly can affect kinetics of enzymes TERM 8
DEFINITION 8 proteins unbind from column using ions. NaCL is used as teh sodium to compete with positively charged proteins to cation exchange. Chlorine can complete with negative charged proteins- anion. They will elute based on the strength of their interaction with the beads. If the pH is close to the pI then they elute first TERM 9
DEFINITION 9 slowly increases the salt concentration used to elute proteins one by one rather than all at once TERM 10
DEFINITION 10 protein is placed in various buffers and precipitation can be observed. This is used to determine which IEX is appropriate which depends upon the pH at which the protein of interest is stable.