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Biochemistry is the systematic study of the chemicals of the living systems, their organization, and the principles of their participation in the processes of life. Its importance is due to the increasing recognition that underlying each and every biological function is a chemical reaction. Hundreds/thousands of chemical reactions are taking place in our cells every minute of our lives. Biochemical investigations have been directed towards the study of the chemical composition of cells and the chemical processes in which they participate.
Several principles are central to the understanding of living organisms:
The life of a cell requires materials , information , and energy: A cell in particular, and a whole organism in general, has three basic needs: materials, information, and energy. Without the daily satisfaction of these, human life would be severely constrained.
The organic materials of life will be considered, starting with the three main classes of foodstuffs – carbohydrates, lipids, and proteins. Humans use these molecules to build and run their bodies and to try to stay in some state of repair. Plants rely heavily on carbohydrate for cell walls, and animals obtain considerable energy from carbohydrates made by plants. Lipids serve many purposes. They are used, both by plants and animals, as materials to make cell membranes and as sources of chemical energy. Proteins are particularly important in both the structures and functions of cells. Because of the catalytic role of proteins in regulating chemical events in cells, the study of proteins will be immediately followed with an examination of enzymes , which make up a particular family of proteins.
Every cell has an information system – enzymes, hormones, and neurotransmitters are components of the intricate information system in the body. Without information, the materials and energy delivered to the body could produce only rubbish. Although enzymes are major players in the cells’ information system, they do not originate the cellular script. They only help to carry out directions that are encoded in the molecular structures of the nucleic acids , which are compounds that are able to direct the synthesis of enzymes. Hormones & neurotransmitters, two other components of cellular information, depend on the presence of right enzymes not only for their existence but for their functions. Thus the study of the enzyme makers, the nucleic acids , is included in any study of the molecular basis of life.
All life processes consist of chemical reactions catalyzed by enzymes. The reactions of a living cell, which are known collectively as metabolism, result in highly coordinated and purposeful activity. Among the most frequent reactions encountered in biochemical processes are:
To supply materials for any use – parts, information, or energy – each organism has basic nutritional needs. These include not just organic materials, including vitamins, but also mineral, water, and oxygen. Thus, together with learning about the materials of life and how they are processed and used, the need for vitamins , minerals , water , and oxygen will also be considered.
Organel l e Prokaryotes Eukaryotes Nucl eus
Cel l membrane Mi tochondri a
Endopl asmi c reti cul um Ri bosomes Chl oropl asts
No defi ni te nucl eus; DNA present but not separate from the rest of the cel l
Present
Present Present None; enzym es for oxi dati on are on pl asma membrane None
Present None; photosynthesi s l ocal i zed i n chromatophores
Present
Present
Present Present i n green pl ants
Based on their cell structures, organisms are divided into two main groups:
1) Monera - only prokaryotic organisms; includes bacteria and cyanobacteria 2) Protista - includes unicellular eukaryotes: yeast, Euglena , Volvox , Amoeba , and Paramecium 3) Fungi - includes molds and mushrooms 4) Plantae Fungi, plants, and animals are multicellular eukaryotes 5) Animals (with few unicellular eukaryotes)
The main difference between prokaryotic and eukaryotic cells is the existence of organelles, especially the nucleus, in eukaryotes. An organelle is a part of the cell that has a distinct function; it is surrounded by its own membrane within the cell.
The study of the composition of the living matter is necessary for the intelligent understanding of the chemical processes taking place in the body. The protoplasm , the living matter, is composed of:
also present in the peroxisomes – thus the cell protects itself from the toxicity of H (^) 2O (^2)
a) bioinorganic substances that include water (70-90%) and inorganic salts (chloride, sulfate, phosphate, carbonate, etc. salts of Na, K, Ca, Mg, NH (^) 4) and
b) bioorganic compounds that include proteins, lipids, carbohydrates, and nucleic acids.
Some importance of water in the cell :
Chemical reactions occurring in vivo have the following properties: