Staining a root tip and calculating its mitotic index, Lecture notes of Molecular biology

Two recommended sources of roots are garlic and hyacinth. ... Suitable stains for studying the stages of mitosis in root tips are lactopropionic orcein and ...

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Unit: Cell and Molecular Biology (AH): Structure, function and growth of prokaryotic and eukaryotic cells
Title: Staining a root tip and calculating its mitotic index
TEACHER/LECTURER GUIDE
Type and purpose of activity
This experiment can be used to:
provide evidence for assessment of Outcome 3
(For advice on marking Outco me 3 report, please contact the SAPS Scotland office.)
develop knowledge and understanding of the process of mitosis
develop problem solving skills and in particular Outcome 2 PCs: (b) infor mation is accurately processed, using
calculations where appropriate (d) experimental procedures are planned, designed and evaluated appropriately
Background information
In this activity stud ents will prepare and stain root tips. To achieve an Outco me 3 students must either have TWO
different sources of root tips OR stain one type of root tip with two different stains. A comparison between EITHER
the root types OR the stains will then be possib le.
This practical is best carried out in the morning to get good results.
Two recommende d sources of roots are garlic and hyacinth. The garlic cloves, bought normally for cooking purposes,
will produce roots at any time of year. Hyacinth bulbs can be bought at Garden Centres during autumn and winter.
Both garlic cloves and hyacinth bulbs will produce ample roots for the experiment.
Suitable stains for studying the stages of mitosis in root tips are lactopropi onic orcein and toluidene blue.
The mitotic index is the fraction of cells in a microscope field which contain condensed chromosomes. This index will
be calculated for each slide prepared.
Preparation of the plant materials and the stains is covered in the Technica l Guide.
To make this activity non-seasonal, it is possible to ‘fix’ the r oot tips when available and then store them until required .
Fixing of root tips is only covered in the Technical Guide.
Classroom management
Students are asked to mark the root tip one or two days prior to staining the root tips. This will enable them to link rate
of growth with mitotic index.
Microscopic exam ination of the slides:
Students should examine severa l slides and ca lculate the mitotic index for each one. Prep ared slides co uld also be
available.
Supply of materials
In order to satisfy the core skill in problem solving, students will be required to identify an d obtain resources required
for themselves. Further advice on supply of material is given in the Technical Guide.
Extension work
Try to vary the mitotic index of the plant tissue e.g. cutting the root tips and keeping them at 0°C for 24 hours may
increase the mito tic index. The experimental method can be varied e.g. varying the temperature or concentration o f
acid; varying the time the root tip is in the acid ; squashing the root tip with a coverslip ins tead of macerating; varying
the age of the root used; preparing the stains differently (e.g. different dilutions, different pHs); heating the
lactopropionic orcein slide gently; investigating a possible link between rate of growth of root and mitotic index.
Acknowledgements
Information and adv ice from Dr Kwiton Jong, Royal Botanic Garden, Edinburgh, is gratefully acknowledg ed.
Information was also received from Ashby Merson-Davies, Sevenoaks School, Kent.
This experiment was produced by the SAPS Biotechnology Scotland Project. Funding for the project was provided by
SAPS, Unilever and The Scottish Office. Support was also provided by Edinburgh University, Quest International, the
Scottish CCC, the Higher Still Development Unit and SSERC.
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Title: Staining a root tip and calculating its mitotic index

TEACHER/LECTURER GUIDE

Type and purpose of activity

This experiment can be used to:

  • provide evidence for assessment of Outcome 3 (For advice on marking Outcome 3 report, please contact the SAPS Scotland office.)
  • develop knowledge and understanding of the process of mitosis
  • develop problem solving skills and in particular Outcome 2 PCs: (b) information is accurately processed, using calculations where appropriate (d) experimental procedures are planned, designed and evaluated appropriately

Background information

  • In this activity students will prepare and stain root tips. To achieve an Outcome 3 students must either have TWO different sources of root tips OR stain one type of root tip with two different stains. A comparison between EITHER the root types OR the stains will then be possible.
  • This practical is best carried out in the morning to get good results.
  • Two recommended sources of roots are garlic and hyacinth. The garlic cloves, bought normally for cooking purposes, will produce roots at any time of year. Hyacinth bulbs can be bought at Garden Centres during autumn and winter. Both garlic cloves and hyacinth bulbs will produce ample roots for the experiment.
  • Suitable stains for studying the stages of mitosis in root tips are lactopropionic orcein and toluidene blue.
  • The mitotic index is the fraction of cells in a microscope field which contain condensed chromosomes. This index will be calculated for each slide prepared.
  • Preparation of the plant materials and the stains is covered in the Technical Guide.
  • To make this activity non-seasonal, it is possible to ‘fix’ the root tips when available and then store them until required. Fixing of root tips is only covered in the Technical Guide.

Classroom management

Students are asked to mark the root tip one or two days prior to staining the root tips. This will enable them to link rate of growth with mitotic index. Microscopic examination of the slides: Students should examine several slides and calculate the mitotic index for each one. Prepared slides could also be available.

Supply of materials

In order to satisfy the core skill in problem solving, students will be required to identify and obtain resources required for themselves. Further advice on supply of material is given in the Technical Guide.

Extension work

Try to vary the mitotic index of the plant tissue e.g. cutting the root tips and keeping them at 0°C for 24 hours may increase the mitotic index. The experimental method can be varied e.g. varying the temperature or concentration of acid; varying the time the root tip is in the acid; squashing the root tip with a coverslip instead of macerating; varying the age of the root used; preparing the stains differently (e.g. different dilutions, different pHs); heating the lactopropionic orcein slide gently; investigating a possible link between rate of growth of root and mitotic index.

Acknowledgements

  • Information and advice from Dr Kwiton Jong, Royal Botanic Garden, Edinburgh, is gratefully acknowledged. Information was also received from Ashby Merson-Davies, Sevenoaks School, Kent.
  • This experiment was produced by the SAPS Biotechnology Scotland Project. Funding for the project was provided by SAPS, Unilever and The Scottish Office. Support was also provided by Edinburgh University, Quest International, the Scottish CCC, the Higher Still Development Unit and SSERC.

Title: Staining a root tip and calculating its mitotic index

TECHNICAL GUIDE

The class will be varying EITHER plant material OR stain for this activity. The list of materials required will vary depending on this decision.

Materials required

Materials required by each student/group:

gloves and eye protection compound microscope (x100 - x400 magnification) small beaker of 1 M hydrochloric acid (2 will be required if plant material is being investigated) small beaker of water and dropper microscope slides coverslips fine forceps dissecting needle scissors soft tissue paper ruler fine thread dropping bottle of lactopropionic orcein AND/OR (see below) dropping bottle of toluidine blue garlic clove with suitable roots AND/OR (see below) hyacinth bulb with suitable roots

Materials to be shared:

water bath at 60°C marker pen timer dropping bottle of 50% glycerol dropping bottle of 70% ethanol lens tissue

Preparation of materials

  • If PLANT MATERIAL is to be varied prepare BOTH plant types below. If STAIN is to be varied prepare just any one of the plant types.
  • To prepare hyacinth bulb roots: Place the bulb in a suitably sized container with water so that the root end is just in contact with the water. It is best to change the water daily if possible. Roots of a suitable length (2-6 cm) will be available within a week and perhaps sooner.
  • CARE! Hyacinth bulbs can cause allergies. Wear gloves if handling the bulbs regularly.
  • To prepare garlic clove roots: Carefully peel the cloves and place in holes in a foam or polystyrene float. Sit the float in a beaker of water so that the base of the clove is in contact with the water. Roots of a suitable length (2-6 cm) will be available after 2-4 days.
  • If STAIN is to be varied prepare BOTH stains, as detailed next. If PLANT MATERIAL is to be varied prepare just any one of the stains.
  • CARE! - Wear gloves and eye protection when handling the stains.
  • Lactopropionic orcein should be prepared in a fume cupboard or well ventilated room. Dilute it to a 45% solution by volume with distilled water.
  • Toluidine blue is harmful if swallowed. Prepare a 0.5% solution in a citrate/phosphate buffer at pH4 (20 cm 3 0.1 M citric acid + 10 cm^3 0.2 M disodium hydrogen phosphate + 8 cm^3 distilled water).

Fixing the roots

  • This stage is required only if suitable roots are available but they are to be stained at a later date.
  • Mix 6 cm 3 absolute alcohol with 2 cm 3 glacial acetic acid in a fume cupboard. This mixture is called Farmer’s fluid and must be freshly prepared. Once added to the Farmer’s fluid, the root tips can be stored for many months in a refrigerator.

Supply of materials

It is not appropriate to provide all equipment and materials in, for example, a tray system for each student/group. Equipment and materials should be supplied in a way that students have to identify and obtain resources. Normal laboratory apparatus

Title: Staining a root tip and calculating its mitotic index

PREPARING FOR THE ACTIVITY

Read through the Student Activity Guide and consider the following questions.

Analysis of activity

  1. What is the aim of the activity?
  2. Do you know if you are using two types of roots OR two types of stain?
  3. What measurements are you going to make?
  4. What safety measures are you required to take?
  5. As a class, decide what a ‘nucleus’ should look like for it to be composed of condensed chromosomes.

6. In your group, decide how the activity will be managed by allocating tasks to each member. For Outcome 3 it is

important that you play an active part in setting up the experiment and in collecting results.

Recording of data

Prepare a table to record your results. You should use a ruler and appropriate headings.

Evaluation

  1. If varying plant material, was rate of growth of the two roots similar. If not, is there a link between mitotic index and rate of growth?
  2. If varying stain, was there a difference in the ability of the root cells to absorb the stains? Were they absorbed too much/insufficiently?
  3. Does the mitotic index vary much between different results? Account for these differences, if possible.
  4. Was the treatment in acid (step 4) sufficient to allow for both easy handling of the root tip and easy maceration? (Insufficient acid treatment results in easy handling but difficult maceration; too severe acid treatment results in difficult handling but easy maceration)

Title: Staining a root tip and calculating its mitotic index

STUDENT ACTIVITY GUIDE

Introduction

You are going to stain root tips and examine them for signs of cells dividing by mitosis. The chromosomes inside the nuclei of such cells condense and become visible. You should know what condensed chromosomes look like and how they move about inside a cell when undergoing mitosis.

Equipment and materials

Materials required by each student/group:

gloves and eye protection compound microscope ( x100 - x400 magnification) small beaker of 1 M hydrochloric acid (2 will be required if plant material is being investigated) small beaker of water and dropper microscope slides coverslips fine forceps dissecting needle scissors soft tissue paper ruler fine thread dropping bottle of lactopropionic orcein AND/OR (see below) dropping bottle of toluidine blue garlic clove with suitable roots AND/OR (see below) hyacinth bulb with suitable roots

Materials to be shared:

water bath at 60°C marker pen timer dropping bottle of 50% glycerol dropping bottle of 70% ethanol lens tissue CARE! Wear gloves and eye protection whilst carrying out this experiment. Avoid skin contact with the stain(s) and avoid breathing in the fumes of the stain, lactopropionic orcein, if used.