advanced methodology previous year question paper, Exams of Immunology

advanced methodology previous year question paper

Typology: Exams

2019/2020

Uploaded on 03/09/2023

navya-gupta
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1. Justify the following statements:
a. A scanning electron microscope is used to examine the cell surface.
b. Wavelength of the illumination light plays an important role in microscopy.
c. FRET is an important technique used to study protein protein interactions.
d. The Fc portion of the antibody plays an important role in the immune based
assays.
e. Heavy metals are used as stains in TEM.
f. It is important to convert the element into a gaseous ion to determine its mass
using mass spectroscopy.
g. Fluorescence microscope has two monochromators.
h. Pull down assays are not usually used to understand Transient protein–protein
interactions
i. Bait and prey are used in yeast 2 hybrid systems.
j. PVDF is superior to nitrocellulose in blotting.
k. Plasmids and oligonucleotides are used for transfection
l. Formalin and paraffin are usually used to preserve the morphology of the cell.
m. Nucleic acids could be fixed to a nylon membrane.
n. Tritium is commonly used for autoradiography.
o. Biology does not use alpha particle emitting radioisotopes for studies.
p. EMSA and footprinting methods are in vitro methods to study protein DNA
interactions.
q. Nucleic acids may be transfected in the form of a plasmid or as oligonucleotides.
r. Tritium is an ideal isotope for use in high resolution autoradiography applications.
s. electron microscopy is performed under high voltage and vacuum.
t. protein microarray preferred over DNA microarray to study gene expression
pattern
2. Define the following:
a. Fluorophore
b. High throughput analysis
c. Immunoprecipitation
d. Transfection
e. Quantum yield
f. Transcriptome
g. Isoelectric pH
h. Reporter assay
i. Immunofluorescence
j. Proteomics
3. Differentiate between the following:
a. FACS and TUNEL assay
b. Scanning and transmission electron microscopy
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  1. Justify the following statements: a. A scanning electron microscope is used to examine the cell surface. b. Wavelength of the illumination light plays an important role in microscopy. c. FRET is an important technique used to study protein protein interactions. d. The Fc portion of the antibody plays an important role in the immune based assays. e. Heavy metals are used as stains in TEM. f. It is important to convert the element into a gaseous ion to determine its mass using mass spectroscopy. g. Fluorescence microscope has two monochromators. h. Pull down assays are not usually used to understand Transient protein–protein interactions i. Bait and prey are used in yeast 2 hybrid systems. j. PVDF is superior to nitrocellulose in blotting. k. Plasmids and oligonucleotides are used for transfection l. Formalin and paraffin are usually used to preserve the morphology of the cell. m. Nucleic acids could be fixed to a nylon membrane. n. Tritium is commonly used for autoradiography. o. Biology does not use alpha particle emitting radioisotopes for studies. p. EMSA and footprinting methods are in vitro methods to study protein DNA interactions. q. Nucleic acids may be transfected in the form of a plasmid or as oligonucleotides. r. Tritium is an ideal isotope for use in high resolution autoradiography applications. s. electron microscopy is performed under high voltage and vacuum. t. protein microarray preferred over DNA microarray to study gene expression pattern
  2. Define the following: a. Fluorophore b. High throughput analysis c. Immunoprecipitation d. Transfection e. Quantum yield f. Transcriptome g. Isoelectric pH h. Reporter assay i. Immunofluorescence j. Proteomics
  3. Differentiate between the following: a. FACS and TUNEL assay b. Scanning and transmission electron microscopy

c. Affinity pull down and tandem affinity purification assay d. Primers and probes e. ChIP and ‘ChIP on Chip’ f. Southern and Northern blotting g. Fluorescent labeling and metabolic labeling h. Southern blotting and Western blotting i. Confocal microscopy and fluorescence microscopy j. Finite and Continuous Cell Line k. 2D gel electrophoresis and 2D-DIGE l. Analytical protein microarray and Functional protein microarray m. Direct and indirect non-radioactive labeling of nucleic acid n. In situ hybridization and Colony hybridization o. Pulse field Electrophoresis and Pulse Chase analysis p. MS/MS and LC/MS

  1. Give the role of the following: a) Monochromator in fluorescence microscopy b) Pre-hybridization buffer in blotting c) DNaseI in DNA footprinting d) Osmium tetroxide in electron microscopy e) BSA/Fat free milk in ELISA f) Argon gas in mass spectrometry g) ATP in luciferase assay h) Trichloroacetic acid in Isoelectric focusing i) BSA in western blotting j) Tryptic digestion of protein in mass-spectrometry. k) Sheath Fluid in FACS l) Formaldehyde in electron microscopy m) Dichroic mirror in fluorescence microscopy n) TEMED in western blotting o) Trypsin in animal cell culture p) Heavy metal stain in electron microscopy q) Nylon membrane in southern blotting r) Fluorophores in FACS s) Non denaturing gel in EMSA t) Secondary antibodies in western blotting u) Optical sectioning in confocal microscopy v) Fluorophores in confocal microscopy
  2. With the help of schematic diagrams explain the methodology, advantages and limitations of the following techniques: a) Co-immunoprecipitation