Case for Evolutionary Thinking - Evolutionary Biology - Lecture Notes, Study notes of Evolutionary biology

Its important key points of lecture notes of Evolutionary Biology are : Case for Evolutionary Thinking, Evolution of Virulence, Aids Treatments, Human Immunodeficiency Virus, Two Distinct Epidemics, Consequences for Host, Azidothymidine, Selection Pressure

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2012/2013

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The Case for Evolutionary Thinking
(The Evolution of Virulence)
Questions to consider from Chapter 1.
1) Why are promising AIDS treatments, like the drug (AZT) proven ineffective in the long run?
2) Why are some people resistant to becoming infected or to progressing to disease status once they
are infected?
3) Why does HIV kill people?
4) Could a vaccine provide protection from the diversity of HIV strains found today?
HIV – Human immunodeficiency virus
AIDS – acquired immune deficiency syndrome
I. Where Does HIV come from?
A. The notoriety of HIV and AIDS. Caused more deaths than the Black Plague.
a. At the end of 2002, 42 million people were living with HIV/AIDS (50 5 women) [Science. Vol.
298, 2003 –70 million people.]
b. Total deaths due to HIV / AIDS as of end 2001 24.8 million. (American Medical Student
Association) [Science. Vol. 298, 2003 –20+ million people.]
B. Two distinct epidemics (comparative epidemiology) that occurred during the 1980-1990s.
a. One in sub-Sahara Africa. Transmitted mostly via heterosexual intercourse.
b. The second occurred in North America and Europe and is transmitted among homosexuals and
needle sharing among intravenous drug users.
II. What is HIV? HIV is a virus. Is it alive? That is, is it considered living?
“A virus is a piece of bad news wrapped in protein” – Sir Peter Medawar.
A. How it operates see pp. 5-6 in Freeman & Herron.
1) HIV is a “retrovirus” because flow of genetic information is backwards.
RNA DNA mRNA protein (instead of DNA RNA protein)
2) Why is an illness due to virus not treatable with antibiotics?
B. Consequences for the host – How does it cause AIDS?
The human body has two courses of action for dealing with viruses.
1) Destroy virions that are traveling in the blood stream.
2) Kill its own infected cells.
3) Because the type of cells attacked are the very ones that the body would use to fight the virus,
HIV hits the body with a double whammy. The immune system becomes severely
compromised.
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The Case for Evolutionary Thinking (The Evolution of Virulence)

Questions to consider from Chapter 1.

  1. Why are promising AIDS treatments, like the drug (AZT) proven ineffective in the long run?
  2. Why are some people resistant to becoming infected or to progressing to disease status once they are infected?
  3. Why does HIV kill people?
  4. Could a vaccine provide protection from the diversity of HIV strains found today?

HIV – Human immunodeficiency virus AIDS – acquired immune deficiency syndrome

I. Where Does HIV come from? A. The notoriety of HIV and AIDS. Caused more deaths than the Black Plague. a. At the end of 2002, 42 million people were living with HIV/AIDS (50 5 women) [Science. Vol. 298, 2003 –70 million people.] b. Total deaths due to HIV / AIDS as of end 2001 24.8 million. (American Medical Student Association) [Science. Vol. 298, 2003 –20+ million people.]

B. Two distinct epidemics (comparative epidemiology) that occurred during the 1980-1990s. a. One in sub-Sahara Africa. Transmitted mostly via heterosexual intercourse. b. The second occurred in North America and Europe and is transmitted among homosexuals and needle sharing among intravenous drug users.

II. What is HIV? HIV is a virus. Is it alive? That is, is it considered living?

“A virus is a piece of bad news wrapped in protein” – Sir Peter Medawar.

A. How it operates see pp. 5-6 in Freeman & Herron.

  1. HIV is a “retrovirus” because flow of genetic information is backwards. RNA Æ DNA Æ mRNA Æ protein (instead of DNA Æ RNA Æ protein)
  2. Why is an illness due to virus not treatable with antibiotics?

B. Consequences for the host – How does it cause AIDS? The human body has two courses of action for dealing with viruses.

  1. Destroy virions that are traveling in the blood stream.
  2. Kill its own infected cells.
  3. Because the type of cells attacked are the very ones that the body would use to fight the virus, HIV hits the body with a double whammy. The immune system becomes severely compromised.

III. The Cure for AIDS A. AZT (azidothymidine)– What it does in the short run

  1. AZT is an nucleotide analog for thymidine that fools the reverse transcriptase.

B. AZT – Why it doesn’t work in the long run. Mutation and the number of generations.

  1. Over time, AZT became less effective.

  2. If you were to design a HIV virion that was not susceptible to AZT, how would you go about it?

  3. Mutations in HIV have produced virions that do not mistake AZT for thymidine. ¾ Those virions that discriminate between AZT and thymidine are more likely to survive and produce new virions. ¾ Those virions that cannot discriminate between AZT and thymidine will decline in numbers.

  4. We can sum the process of AZT resistance in four steps. 1- The virus reverse transcriptase makes mistakes in the virus DNA. 2- There is variation in the population of virions with regard to the type of mistakes encoded in the DNA. 3- A virion with DNA that has a ‘mistake’ encoded in it is not susceptible to AZT. These are better able to survive, and to reproduce. 4- This ‘mistake’, or mutation in the DNA is passed on to the offspring. They too are resistant to AZT. This is evolution by natural selection.

  5. When the selection pressure is removed, the population goes back to those virions consisting mostly of susceptible variants. ¾ This indicates that natural selection is not unidirectional. ¾ Natural selection is reversible.

IV. The Evolution of Virulence – Why is AIDS fatal? Virulence – Violent and rapid in its course; highly infectious. Disease – Any departure from health; illness in general. A particular destructive process in an organ or organism.

A. If a pathogen kills it’s host, it must disperse.

  1. The more virulent a pathogen is the sooner it must find a host. ¾ What is the fitness value in that? B. Why doesn’t HIV have a more benign impact on it’s hosts? Some possibilities
  2. HIV lacks the ability to operate otherwise, e.g.
  3. Perhaps a benign state has not been selected for because there is not enough variation in virulence for selection to operate on.
  4. High virulence has been selected for. The work of Paul Ewald. a) If the transmission of sexually transmitted disease from an existing host to a new host is frequent, then virulence will be high. b) On the other hand, if the transmission rate from an existing host to a new host is low, then virulence will be low.