Image Processing with Biomedical Applications: Fundamentals and Human Vision, Exercises of Digital Image Processing

An overview of the Image Processing with Biomedical Applications course offered by Prof. Barner at the University of Delaware. various topics related to image processing, including the structure of the human eye, brightness adaptation and discrimination, Weber ratio, simultaneous contrast, and human perception influences. It also discusses the electromagnetic spectrum, radiance and luminance, image acquisition, sampling and quantization, and digital image representation.

Typology: Exercises

2019/2020

Uploaded on 04/20/2020

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Image Processing with Biomedical
Applications
ELEG-475/675
Prof. Barner
Image Processing
Introduction
Prof. Barner, ECE Department,
University of Delaware 2
Course Materials & Evaluation
Books
Digital Image Processing, Gonzalez & Woods
Introduction to the Mathematics of Medical
Imaging, Epstein
Evaluation
Tests: midterm and final
Homework and small projects
Final independent research project
Independent reading – Ch. 1, Introduction
Imaging Fundamentals
Image Processing with Biomedical
Applications
ELEG-475/675
Prof. Barner
Image Processing
Imaging Fundamentals
Prof. Barner, ECE Department,
University of Delaware 4
Structure of the Human Eye
Enclosing membranes:
Outer cornea, sclera
Choroid
Retina
Iris opening (2-8 mm)
Retina light receptors
Cones in fovea
6-7 million
color sensitive
Photopic (bright-light) vision
Rods
75-150 million
Not color sensitive
Scotopic (low-light) vision
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Download Image Processing with Biomedical Applications: Fundamentals and Human Vision and more Exercises Digital Image Processing in PDF only on Docsity!

Image Processing with Biomedical

Applications

ELEG-475/

Prof. Barner

Image Processing Introduction Prof. Barner, ECE Department, University of Delaware 2

Course Materials & Evaluation

„ Books

‰ Digital Image Processing, Gonzalez & Woods ‰ Introduction to the Mathematics of Medical Imaging, Epstein

„ Evaluation

‰ Tests: midterm and final ‰ Homework and small projects ‰ Final independent research project

„ Independent reading – Ch. 1, Introduction

Imaging Fundamentals

Image Processing with Biomedical Applications ELEG-475/ Prof. Barner

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 4

Structure of the Human Eye

„ Enclosing membranes: ‰ Outer – cornea, sclera ‰ Choroid ‰ Retina „ Iris opening (2-8 mm) „ Retina light receptors ‰ Cones in fovea „ 6-7 million „ color sensitive „ Photopic (bright-light) vision ‰ Rods „ 75-150 million „ Not color sensitive „ Scotopic (low-light) vision

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 5

Distribution of Rods and Cones

„ Fovea ‰ Size: approximately 1.5 mm x 1.5 mm ‰ Cone density: approximately 150,000 elements per mm 2

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 6

Focal Length

„ Focal length ‰ distance between lens center and retina ‰ Approximately 14-17 mm „ By geometry, the image in the above example is 2.55 mm high on the retina ‰ Falls primarily in the fovea

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 7

Brightness Adaptation and Discrimination

„ Light sensitivity range: 10 10 „ Subjective (perceived) brightness logarithmic „ Entire range cannot be perceived simultaneously ‰ Brightness adaptation „ Photopic (cone) range is greater than scotopic (rod) range

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 8

Weber Ratio

„ Ability to discriminate between changes in light intensity ‰ Flat field I ‰ Short duration increment ∆ I ‰ Record 50% discrimination point „ Brightness discrimination is poor at low levels of illumination „ Rods have better discrimination

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 13

Electromagnetic Spectrum

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 14

Wavelength, Frequency, and Energy

„ Wavelength (λ) and frequency (ν) relation:

where c is the speed of light (2.998x10 8 m/s) „ Energy (electron-volts) is given by

where h Planck’s constant „ Electromagnetic waves can be visualized as: ‰ Propagating sinusoidal waves ‰ A stream of massless particles (photons) moving at the speed of light „ Higher frequency photons possess more energy ‰ Gamma rays are dangerous while radio waves are not

λ = c /ν

E = hv

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 15

Radiance and Luminance

„ Monochromatic (achromatic) light is void of color ‰ Intensity (gray level) is the defining attribute „ Radiance is the total energy that flows from a light source „ Luminance is the level of energy and observer perceives from a light source

„ Fundamental limit: ‰ To see an object the electromagnetic wavelength must be no bigger than the object ‰ To image molecules far ultraviolet or soft x-ray waves must be used

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 16

Image Acquisition

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 17

Various Acquisition Methodologies

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 18

Digital Image Acquisition

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 19

Simple Image Formation Model

„ An image is proportional to the radiated

energy

‰ Illumination bound: ‰ Reflectivity bound: „ Transmission cases (x-ray): transmissivity rather than reflectivity ‰ Frequency dependent functions

f ( , x y ) = i x y r x y ( , ) ( , )

0 < i x y ( , )< ∞

0 < r x y ( , ) < 1

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 20

Sampling and Quantization

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 25

Spatial Resolution (Fixed Image Size)

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 26

Grade Level Resolution

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 27

Resolution and Image Detail

„ Resolution requirements are detail-level dependent

„ Isopreference curves give ( N,k) pairs that produce equal subjective quality Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 28

Isopreference Curves

„ Subjective quality for detailed images depends primarily on spatial resolution „ Low detail images are sensitive to the number of gray levels

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 29

Aliasing and Moire Patterns

„ Shannon Sampling Theorem: signals must be sampled at a rate at least twice the highest frequency to avoid aliasing

„ Paradox ‰ Only infinite time duration signals may be band-limited ‰ Finite time duration signals have infinite bandwidth ‰ No practical signals are band-limited

„ Special case: periodic signals can be preserved by sampling over a finite interval ‰ The sampling must capture an integer number of periods

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 30

Moire Pattern Effect

„ Each grate is periodic „ Their superposition breaks the periodicity ‰ Aliasing occurs „ The problem is common in scanning of printed material ‰ Periodicities do not line up causing aliasing

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 31

Image Zooming and Shrinking

„ Both operations involve resampling ‰ Zooming is oversampling ‰ Shrinking is undersampling

„ Nearest neighbor interpolation ‰ Overlay two sampling grids (known and unknown) ‰ Populate unknown grid with the closest sample from unknown grid ‰ Special case: pixel replication „ Integer increases in sampling rate „ Repeat rows, columns, etc.

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 32

Bilinear Interpolation

„ Unknown pixels are formed as a (distance) weighted sum of the four closest known pixels

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 37

Adjacency Example II

„ Consider the 4-, 8-, and m-paths of this figure ‰ Binary case, V ={1}

„ Under what connectivity are the 45° and -45° lines distinct?

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 38

Paths, Regions, and Boundaries

„ A path is closed if p^0 =p N „ Let S be a subset of pixels in an image ‰ p and q are connected in S if there exists a path between them consisting entirely of pixels in S ‰ For any p in S , the set of pixels connected to p in S is the connected component of S ‰ S is a connected set if it has only one connected component „ Connected subsets are referred to as regions ‰ The boundary of a region R is the set of pixels in the region that have one or more neighbors outside R „ Boundaries form closed paths (different concept than edge)

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 39

Distance Measures

„ Let p, q, and z be pixels. D is a distance functions (metric) if ‰ D ( p,q )≥ 0 ( D ( p,q )=0 iff p=q ), ‰ D ( p,q )= D ( q,p ), and ‰ D ( p,z )≤ D ( p,q )+ D ( q,z )

„ Euclidean distance: D (^) e ( p,q)= [( p (^) c1 -q (^) c1 )^2 + ( p (^) c2 -q (^) c2 )^2 ]½

„ City-block distance: D 4 ( p,q)= | p (^) c1 -q (^) c1 |+ | p (^) c2 -q (^) c2 |

„ Chessboard distance: D 8 ( p,q )=max(| p (^) c1 -q (^) c1 |, | p (^) c2 -q (^) c2 |)

Image Processing Imaging Fundamentals Prof. Barner, ECE Department, University of Delaware 40

Distance examples

„ D 4 example: 2 2 1 2 2 1 0 1 2 2 1 2 2 „ D 8 example:

„ D (^) m distance is defined as the length of the shortest m -path

2 2 2 2 2 2 1 1 1 2 2 1 0 1 2 2 1 1 1 2 2 2 2 2 2